nii2msh

Description

Interpolates NifTI volumes to mesh files. Mostly used internally by dwi2cond

Usage example

  1. Open a terminal and go to the directory of the “Ernie” example data set.

  2. Run

nii2msh -ev d2c_ernie/dti_results_T1space/DTI_conf_tensor.nii.gz ernie.msh ernie_tensor.msh

  1. This will create the ernie_tensor.msh file. This file will contain the eigenvectors associated with the largest eigenvalues of the conductivity tensors (for visual control).

Further notes

  • Type nii2msh -h for more information and options