Optional Dependencies

MATLAB

SimNIBS has a MATLAB API, available in the matlab_tools/ subfolder of the SimNIBS installation directory. Please add it to the matlab search path to make it available in your matlab.

FSL

Required by: dwi2cond

1. Follow the instructions on this link

2. Add

source /etc/fsl/5.0/fsl.sh

in the end of the ~/.bashrc (Linux) or ~/.bash_profile (MacOSX) file (assuming that fsl is installed as usually into /etc/fsl/5.0).