SimNIBS includes 3rd party open-source and free code and binaries from several projects and research groups:

ADMlib¶

github.com/luisgo/Auxiliary_dipole_methodLicense and link to online license text (if existing):GNU General Public Licence (GPL-v2.0), for non-commercial and academic purposes only Commercial Licence for commercial use without the GPL-v2.0 restrictions.Copyright(c) copyrights Duke University.As a recipient of this software, you may choose which Licence to receive the code under. Outside contributions to the Duke owned code base cannot be accepted unless the contributor transfers the copyright to those changes over to Duke University.To enter a commercial Licence agreement, please contact the Digital Innovations department at Duke Office of Licensing and Ventures (https://olv.duke.edu/software/) at olvquestions@duke.edu with reference to “OLV File No. 7148” in your email. Please note that this software is distributed AS IS, WITHOUT ANY WARRANTY; and without the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

BLAS¶

www.netlib.org/blasLicense and link to online license text (if existing):custom license, “freely-available software package”www.netlib.org/blas/#_licensingCopyright?

CAT12¶

www.neuro.uni-jena.de/catLicense and link to online license text (if existing):GNU General Public License (GPL), Version 2 or laterCopyrightChristian Gaser and Robert Dahnke (Jena University Hospital, Germany)

CGAL¶

www.cgal.orgLicense and link to online license text (if existing):GNU General Public License (GPL), Version 3 or later Or a commercial licensewww.cgal.org/license.htmlCopyrightCopyright (c) 1995-2024 The CGAL Project

charm-gems¶

github.com/simnibs/charm-gemsLicense and link to online license text (if existing):GNU General Public License (GPL), Version 3 or latergithub.com/simnibs/charm-gems?tab=GPL-3.0-1-ov-file#readmeCopyrightOula Puonti and Koen Van Leemput

Cygwin API library¶

www.cygwin.comLicense and link to online license text (if existing):GNU LGPLv3www.cygwin.com/licensing.htmlCopyrightCygwin projectRemarksused for meshfix on Windows

FMM3D¶

github.com/flatironinstitute/FMM3DLicense and link to online license text (if existing):Apache License, Version 2.0github.com/flatironinstitute/FMM3D?tab=License-1-ov-file#readmeCopyrightCopyright (C) 2019-2023 The Simons Foundation, Inc., FMM3D Development Team

FSL¶

fsl.fmrib.ox.ac.uk/fsl/docs/#/License and link to online license text (if existing):custom license, “free for non-commercial purposes”fsl.fmrib.ox.ac.uk/fsl/docs/#/licenseCopyright(c) 2018, The University of OxfordRemarksused by dwi2cond

GMP¶

www.gmplib.orgLicense and link to online license text (if existing):Dual-licensed under GNU LGPL v3 and GNU GPL v2www.gmplib.orgCopyrightgmplib.org/manual/Contributors

gmsh¶

www.gmsh.infoLicense and link to online license text (if existing):GNU General Public License (GPL), Version 2 or laterwww.gmsh.info/LICENSE.txtCopyrightChristophe Geuzaine <cgeuzaine at uliege.be> and Jean-Francois Remacle <jean-francois.remacle at uclouvain.be>Remarksused for results visualisation

Intel MKL¶

www.intel.com/content/www/us/en/developer/tools/oneapi/onemkl-download.htmlLicense and link to online license text (if existing):Intel Simplified Software Licensewww.intel.com/content/www/us/en/developer/articles/license/end-user-license-agreement.html#inpage-nav-2CopyrightIntelRemarksIntel MKL Pardiso solver is used for FEM on Windows and Linux

Jupyterlab¶

jupyterlab.readthedocs.io/en/latestLicense and link to online license text (if existing):revised BSD licensegithub.com/jupyterlab/jupyterlab/blob/main/LICENSECopyrightProject Jupyter

Matplotlib¶

matplotlib.orgLicense and link to online license text (if existing):PSF licensematplotlib.org/stable/project/license.htmlCopyrightMatplotlib Development Team

meshfix¶

pymeshfix.pyvista.orgLicense and link to online license text (if existing):GNU General Public License (GPL), Version 3 or later Or a commercial licensepymeshfix.pyvista.org/#copyrightCopyrightCopyright(C) 2010: IMATI-GE / CNR

Mmg¶

www.mmgtools.orgLicense and link to online license text (if existing):GNU Lesser General Public License (LGPL)raw.githubusercontent.com/MmgTools/mmg/master/LICENSECopyrightMmg consortium

MPFR¶

www.mpfr.orgLicense and link to online license text (if existing):GNU Lesser GPL, version 3 or laterwww.mpfr.orgCopyrightregistered in France by the Agence de Protection des Programmes under the number IDDN FR 001 120020 00 R P 2000 000 10800, on 15 March 2000

MUMPS¶

mumps-solver.orgLicense and link to online license text (if existing):CeCILL-C Licencececill.info/licences/Licence_CeCILL-C_V1-en.htmlCopyrightThe copyrights of this software are owned by CERFACS, CNRS, ENS Lyon, INP Toulouse, Inria, Mumps Technologies, University of Bordeaux

nibabel¶

github.com/nipy/nibabel/tree/masterLicense and link to online license text (if existing):MIT licensegithub.com/nipy/nibabel/blob/master/COPYINGCopyrightCopyright (c) 2009-2019 Matthew Brett <matthew.brett@gmail.com> Copyright (c) 2010-2013 Stephan Gerhard <git@unidesign.ch> Copyright (c) 2006-2014 Michael Hanke <michael.hanke@gmail.com> Copyright (c) 2011 Christian Haselgrove <christian.haselgrove@umassmed.edu> Copyright (c) 2010-2011 Jarrod Millman <jarrod.millman@gmail.com> Copyright (c) 2011-2019 Yaroslav Halchenko <debian@onerussian.com> Copyright (c) 2015-2019 Chris Markiewicz <effigies@gmail.com>

NumPy¶

PETSc¶

petsc.org/release/License and link to online license text (if existing):2-clause BSD licensepetsc.org/release/install/license/CopyrightCopyright (c) 1991-2024, UChicago Argonne, LLC and the PETSc Development TeamRemarksplease see the PETsc wheel repository on the SimNIBS github for a list of the included dependencies

pygpc¶

github.com/pygpc-polynomial-chaos/pygpcLicense and link to online license text (if existing):GNU General Public License (GPL), Version 3github.com/pygpc-polynomial-chaos/pygpc/blob/master/LICENSECopyrightKonstantin Weise

PyQt5¶

www.riverbankcomputing.com/software/pyqt/introLicense and link to online license text (if existing):GNU General Public License (GPL), Version 3 or a commercial Licensewww.riverbankcomputing.com/commercial/license-faqCopyright(c) Riverbank Computing LimitedRemarksused by simnibs_gui

Python¶

www.python.org License and link to online license text (if existing):PSF license and Zero-Clause BSD licensedocs.python.org/3/license.html#bsd0docs.python.org/3/license.html#psf-licenseCopyrightPython Software Foundation

pyvista¶

pyvista.orgLicense and link to online license text (if existing):MIT licensegithub.com/pyvista/pyvista/blob/main/LICENSECopyrightCopyright (c) 2017-2024 The PyVista DevelopersRemarksused in vtk reader and writer

Qt¶

www.qt.ioLicense and link to online license text (if existing):Qt is available under different licensing options designed to accommodate the needs of our various users:Qt licensed under commercial licenses is appropriate for development of proprietary/commercial software where you do not want to share any source code with third parties or otherwise cannot comply with the terms of the GNU LGPL version 3.Qt licensed under the GNU Lesser General Public License (LGPL) version 3 is appropriate for the development of Qt applications provided you can comply with the terms and conditions of the GNU LGPL version 3 (or GNU GPL versionQt components licensed under the Qt Marketplace License Agreement are appropriate for the development of Qt applications commonly with Qt software components licensed under the commercial or GNU LGPL version 3 (or GNU GPL version 3) terms and conditions.doc.qt.io/qt-6/licensing.htmlCopyrightThe Qt CompanyRemarksused by simnibs_gui

SCIKIT-IMAGE¶

scikit-image.orgLicense and link to online license text (if existing):BSD-3-Clausescikit-image.org/docs/dev/license.htmlCopyrightCopyright (C) 2011, the scikit-image teamRemarksMarching cube algorithm copied from SCIKIT-IMAGE

SciPy¶

scipy.orgLicense and link to online license text (if existing):BSD 3-Clause Licensegithub.com/scipy/scipy/blob/main/LICENSE.txtCopyrightCopyright (c) 2003-2024, SciPy Developers Copyright (c) 2001-2002 Enthought, Inc

ZLIB¶

github.com/madler/zlibLicense and link to online license text (if existing):MIT-like licensegithub.com/madler/zlib?tab=License-1-ov-file#readmeCopyrightCopyright (C) 1995-2017 Jean-loup Gailly and Mark Adler